diff --git a/lib/iddl/iddl.jar b/lib/iddl/iddl.jar
index 286099a1b682313c2a524d20b7fbf8afaa15f42d..74b8fb8970b9164cf3a3a813df5ee16e48c4ebf3 100644
Binary files a/lib/iddl/iddl.jar and b/lib/iddl/iddl.jar differ
diff --git a/lib/iddl/iddl.pom b/lib/iddl/iddl.pom
index 7640aa959fc23b963984720de2e6118a4063d783..201fefb0f8042d65668b6d35c929a79afaa1c640 100644
--- a/lib/iddl/iddl.pom
+++ b/lib/iddl/iddl.pom
@@ -1,11 +1,12 @@
<project>
<modelVersion>4.0.0</modelVersion>
- <groupId>fr.inrialpes.exmo</groupId>
+ <groupId>fr.paris8.iut.info.iddl</groupId>
<artifactId>iddl</artifactId>
- <version>1.3-20100331</version>
+ <version>1.4d</version>
+ <!-- Unreleased version of 2013-03-01 -->
<name>Integrated Distributed Description Logic</name>
- <description>A Resonner for Integrated Distributed Description Logic - special revision of 31/03/2010 (revision 49+)</description>
+ <description>A Resonner for Integrated Distributed Description Logic</description>
<licenses>
<license>
<name>GNU LESSER GENERAL PUBLIC LICENSE Version 2.1, February 1999</name>
@@ -14,17 +15,14 @@
</licenses>
<url>http://iddl.gforge.inria.fr/</url>
- <!--distributionManagement>
- <downloadUrl></downloadUrl>
- </distributionManagement-->
- <!-- align api? Pellet? OWLAPI? -->
- <dependencies>
+ <!-- alignapi owlapi, clairement -->
+ <!--dependencies>
<dependency>
<groupId></groupId>
<artifactId></artifactId>
<version></version>
</dependency>
- </dependencies>
+ </dependencies-->
</project>
diff --git a/src/fr/inrialpes/exmo/align/impl/BasicEvaluator.java b/src/fr/inrialpes/exmo/align/impl/BasicEvaluator.java
index 7dd909b2b94b2c3eb7e2c31f8f9072659ddd5f4e..13a84723a10ab1be8f320f3baa429564cb7bc722 100644
--- a/src/fr/inrialpes/exmo/align/impl/BasicEvaluator.java
+++ b/src/fr/inrialpes/exmo/align/impl/BasicEvaluator.java
@@ -1,7 +1,7 @@
/*
* $Id$
*
- * Copyright (C) INRIA, 2004, 2007-2008, 2010
+ * Copyright (C) INRIA, 2004, 2007-2008, 2010, 2013
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
@@ -24,6 +24,9 @@ import org.semanticweb.owl.align.Alignment;
import org.semanticweb.owl.align.AlignmentException;
import org.semanticweb.owl.align.Evaluator;
+import fr.inrialpes.exmo.align.impl.ObjectAlignment;
+import fr.inrialpes.exmo.align.impl.URIAlignment;
+
import java.io.PrintWriter;
/**
@@ -40,23 +43,25 @@ public abstract class BasicEvaluator implements Evaluator {
/** Creation **/
public BasicEvaluator( Alignment align1, Alignment align2 ) throws AlignmentException {
- /*
- * JE: This is obviously a killer test.
- * Most of the matcher do not fill this correctly
- * This should be made smoother
- if ( !align1.getOntology1URI().equals( align2.getOntology1URI() )
- || !align1.getOntology2URI().equals( align2.getOntology2URI() ) ) {
- System.err.println( " r1: "+align1.getOntology1URI() +" -- "+align1.getFile1() );
- System.err.println( " r2: "+align1.getOntology2URI() +" -- "+align1.getFile2() );
- System.err.println( " u1: "+align2.getOntology1URI() +" -- "+align2.getFile1() );
- System.err.println( " u2: "+align2.getOntology2URI() +" -- "+align2.getFile2() );
- throw new AlignmentException( "The alignments must align the same ontologies\n" );
- }
- */
this.align1 = align1;
this.align2 = align2;
}
+ public void convertToObjectAlignments( Alignment al1, Alignment al2 ) throws AlignmentException {
+ align1 = convertToObjectAlignment( al1 );
+ align2 = convertToObjectAlignment( al2 );
+ }
+
+ public ObjectAlignment convertToObjectAlignment( Alignment al ) throws AlignmentException {
+ if ( al instanceof ObjectAlignment ) {
+ return (ObjectAlignment)al;
+ } else if ( al instanceof URIAlignment ) {
+ return ObjectAlignment.toObjectAlignment( (URIAlignment)al );
+ } else {
+ throw new AlignmentException( "Cannot convert to ObjectAlignment : "+al );
+ }
+ }
+
public void write( PrintWriter writer ) throws java.io.IOException {
writer.print("<rdf:RDF>\n <Evaluation class=\"BasicEvaluator\">\n <result>");
writer.print(result);
diff --git a/src/fr/inrialpes/exmo/align/impl/IDDLOntologyNetwork.java b/src/fr/inrialpes/exmo/align/impl/IDDLOntologyNetwork.java
index 6f9ab44d4a99cee63965967c0f7546b573b4cd66..efe7a817a1c6d66d7a24bcddaa42d2410c68c3a1 100644
--- a/src/fr/inrialpes/exmo/align/impl/IDDLOntologyNetwork.java
+++ b/src/fr/inrialpes/exmo/align/impl/IDDLOntologyNetwork.java
@@ -1,7 +1,7 @@
/*
* $Id: IDDLOntologyNetwork.java 987 2009-05-27 13:48:33Z euzenat $
*
- * Copyright (C) INRIA, 2009-2010
+ * Copyright (C) INRIA, 2009-2010, 2013
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public License as published by
@@ -35,8 +35,9 @@ import org.semanticweb.owl.align.Alignment;
import org.semanticweb.owl.align.AlignmentException;
import org.semanticweb.owl.align.LogicOntologyNetwork;
-import fr.inrialpes.exmo.iddl.IDDLReasoner;
-import fr.inrialpes.exmo.iddl.conf.Semantics;
+import fr.paris8.iut.info.iddl.IDDLReasoner;
+import fr.paris8.iut.info.iddl.IDDLException;
+import fr.paris8.iut.info.iddl.conf.Semantics;
/**
* Represents a distributed system of aligned ontologies or network of ontologies.
@@ -69,11 +70,7 @@ public class IDDLOntologyNetwork extends BasicOntologyNetwork implements LogicOn
public void setSemantics( String s ){
semantics = s;
if ( reasoner != null ) {
- if ( semantics.equals( "DL" ) ) {
- reasoner.setSemantics( Semantics.DL );
- } else {
- reasoner.setSemantics( Semantics.IDDL );
- }
+ reasoner.setSemantics( Semantics.valueOf( s ) );
}
};
public String getSemantics(){
@@ -83,9 +80,14 @@ public class IDDLOntologyNetwork extends BasicOntologyNetwork implements LogicOn
init();
return reasoner.isConsistent();
};
- public boolean isEntailed( Alignment al ){
+ public boolean isEntailed( Alignment al ) {
init();
- return reasoner.isEntailed( al );
+ try {
+ return reasoner.isEntailed( al );
+ } catch ( IDDLException idex ) {
+ idex.printStackTrace();
+ return false;
+ }
};
}
diff --git a/src/fr/inrialpes/exmo/align/impl/eval/ExtPREvaluator.java b/src/fr/inrialpes/exmo/align/impl/eval/ExtPREvaluator.java
index fa0676f027ed3850b6fd8da379b0de67cef9ccc0..f2a414820fa862fa027fe39d68f6343efacb24f6 100644
--- a/src/fr/inrialpes/exmo/align/impl/eval/ExtPREvaluator.java
+++ b/src/fr/inrialpes/exmo/align/impl/eval/ExtPREvaluator.java
@@ -107,6 +107,7 @@ public class ExtPREvaluator extends BasicEvaluator implements Evaluator {
/** Creation **/
public ExtPREvaluator(Alignment align1, Alignment align2) throws AlignmentException {
super(align1, align2);
+ convertToObjectAlignments( align1, align2 );
}
public void setConfidence( boolean b ) { withConfidence = b; }
@@ -141,9 +142,6 @@ public class ExtPREvaluator extends BasicEvaluator implements Evaluator {
public double eval( Properties params, Object cache ) throws AlignmentException {
if ( params.getProperty( "noconfidence" ) != null ) withConfidence = false;
if ( params.getProperty( "relations" ) != null ) relsensitive = true;
- // Better to transform them instead...
- if ( !( align1 instanceof ObjectAlignment ) || !( align2 instanceof ObjectAlignment ) )
- throw new AlignmentException( "ExtPREvaluation: requires ObjectAlignments" );
LoadedOntology<Object> o1 = (LoadedOntology<Object>)((ObjectAlignment)align1).getOntologyObject1();
LoadedOntology<Object> o2 = (LoadedOntology<Object>)((ObjectAlignment)align1).getOntologyObject2();
if ( !( o1 instanceof HeavyLoadedOntology ) || !( o2 instanceof HeavyLoadedOntology ) )
diff --git a/src/fr/inrialpes/exmo/align/impl/eval/SemPRecEvaluator.java b/src/fr/inrialpes/exmo/align/impl/eval/SemPRecEvaluator.java
index b854f89a2d3ad706ce758b6723806cb7212a3c0b..b0103186adfb71d39d1047fa0f46ed690643d0c6 100644
--- a/src/fr/inrialpes/exmo/align/impl/eval/SemPRecEvaluator.java
+++ b/src/fr/inrialpes/exmo/align/impl/eval/SemPRecEvaluator.java
@@ -40,10 +40,12 @@ import fr.inrialpes.exmo.ontowrap.Ontology;
import fr.inrialpes.exmo.ontowrap.LoadedOntology;
import fr.inrialpes.exmo.ontowrap.OntowrapException;
-//import fr.paris8.iut.info.iddl.IDDLReasoner;
-//import fr.paris8.iut.info.iddl.conf.Semantics;
+// ---- IDDL
+import fr.paris8.iut.info.iddl.IDDLReasoner;
+import fr.paris8.iut.info.iddl.IDDLException;
+import fr.paris8.iut.info.iddl.conf.Semantics;
-// HermiT implementation
+// ---- HermiT Implementation
import org.semanticweb.owlapi.model.IRI;
import org.semanticweb.owlapi.model.OWLOntology;
@@ -64,6 +66,9 @@ import org.semanticweb.owlapi.reasoner.BufferingMode;
import org.semanticweb.HermiT.Reasoner;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
import java.io.File;
import java.io.IOException;
import java.io.FileWriter;
@@ -75,6 +80,7 @@ import java.io.OutputStreamWriter;
import java.io.UnsupportedEncodingException;
import java.lang.Thread;
import java.lang.Runnable;
+import java.lang.IllegalArgumentException;
import java.util.Properties;
import java.util.Enumeration;
@@ -94,10 +100,12 @@ import java.net.URI;
public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
+ final Logger logger = LoggerFactory.getLogger( SemPRecEvaluator.class );
private int nbfoundentailed = 0; // nb of returned cells entailed by the reference alignment
private int nbexpectedentailed = 0; // nb of reference cells entailed by returned alignment
- //private Semantics semantics = Semantics.DL; // the semantics used for interpreting alignments
+ private Semantics semantics = null; // the semantics used for interpreting alignments
+ // null means that we use the reduced semantics with HermiT, otherwise, this is an IDDL semantics
/** Creation
* Initiate Evaluator for precision and recall
@@ -105,31 +113,20 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
* @param align2 : the alignment to evaluate
**/
public SemPRecEvaluator( Alignment al1, Alignment al2) throws AlignmentException {
- super(((BasicAlignment)al1).toURIAlignment(), ((BasicAlignment)al2).toURIAlignment());
- try {
- if ( al1 instanceof ObjectAlignment ) {
- align1 = al1;
- } else {
- align1 = ObjectAlignment.toObjectAlignment((URIAlignment)align1);
- }
- if ( al2 instanceof ObjectAlignment ) {
- align2 = al2;
- } else {
- align2 = ObjectAlignment.toObjectAlignment((URIAlignment)align2);
- }
- } catch ( AlignmentException aex ) {
- throw new AlignmentException( "SemPRecEvaluator can only work on ObjectAlignments", aex );
- }
+ super( al1, al2 );
+ logger.info( "Created one SemPREvaluator" );
+ convertToObjectAlignments( al1, al2 );
}
- public void init( Object sem ){
+ public void init( Properties params ){
super.init(); // ??
nbexpectedentailed = 0;
nbfoundentailed = 0;
- // Better use Properties
- //if ( sem instanceof Semantics ) {
- // semantics = (Semantics)sem;
- //}
+ // Set the semantics to be used
+ String sem = params.getProperty( "semantics" );
+ if ( sem != null ) {
+ semantics = Semantics.valueOf( sem );
+ }
}
/**
@@ -146,10 +143,10 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
*
* In the implementation |B|=nbfound, |A|=nbexpected and |A inter B|=nbcorrect.
*
- * This takes semantivs as a parameter which should be a litteral of fr.paris8.iut.info.iddl.conf.Semantics
+ * This takes semantics as a parameter which should be a litteral of fr.paris8.iut.info.iddl.conf.Semantics
*/
public double eval( Properties params ) throws AlignmentException {
- init( params.getProperty( "semantics" ) );
+ init( params );
nbfound = align2.nbCells();
nbexpected = align1.nbCells();
@@ -172,37 +169,47 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
}
public int nbEntailedCorrespondences( ObjectAlignment al1, ObjectAlignment al2 ) throws AlignmentException {
- //System.err.println( "Computing correctness" );
- //IDDLReasoner reasoner = new IDDLReasoner( semantics );
- //loadOntology( reasoner, ((BasicAlignment)al1).getOntologyObject1() );
- //loadOntology( reasoner, ((BasicAlignment)al1).getOntologyObject2() );
- //reasoner.addAlignment( al1 );
- loadPipedAlignedOntologies( al1 );
+ logger.debug( "Computing entailment (semantics: {})", semantics );
+ if ( semantics != null ) { // IDDL
+ IDDLReasoner iddlreasoner = new IDDLReasoner( semantics );
+ loadOntology( iddlreasoner, ((BasicAlignment)al1).getOntologyObject1() );
+ loadOntology( iddlreasoner, ((BasicAlignment)al1).getOntologyObject2() );
+ iddlreasoner.addAlignment( al1 );
+ reasoner = iddlreasoner;
+ } else { // Hermit
+ loadPipedAlignedOntologies( al1 );
+ }
if ( !reasoner.isConsistent() ) return al2.nbCells(); // everything is entailed
- //System.err.println( al1+" is consistent" );
+ logger.debug( "{} is consistent", al1 );
int entailed = 0;
for ( Cell c2 : al2 ) {
- // create alignment
- //Alignment al = new ObjectAlignment();
- //al.init( align2.getOntology1URI(), align2.getOntology2URI() );
- // add the cell
- //al.addAlignCell( c2.getObject1(), c2.getObject2(), c2.getRelation().getRelation(), 1. );
- //System.err.println( c2.getObject1()+" "+c2.getRelation().getRelation()+" "+c2.getObject2() );
- //if ( reasoner.isEntailed( al ) ) {
- try {
- if ( reasoner.isEntailed( correspToAxiom( al2, (ObjectCell)c2 ) ) ) {
- //System.err.println( " --> entailed" );
- entailed++;
+ logger.trace( c2.getObject1()+" {} {}", c2.getRelation().getRelation(), c2.getObject2() );
+ if ( semantics != null ) { // IDDL
+ try {
+ if ( ((IDDLReasoner)reasoner).isEntailed( al2, c2 ) ) {
+ logger.trace( " --> entailed" );
+ entailed++;
+ }
+ } catch (IDDLException idex) { // counted as non entailed
+ logger.warn( "Cannot be translated." );
+ }
+ } else { // Hermit
+ try {
+ if ( reasoner.isEntailed( correspToAxiom( al2, (ObjectCell)c2 ) ) ) {
+ logger.trace( " --> entailed" );
+ entailed++;
+ }
+ } catch ( AlignmentException aex ) { // type mismatch -> 0
+ logger.warn( "Cannot be translated." );
}
- } catch ( AlignmentException aex ) { // type mismatch -> 0
- //System.err.println( "Cannot be translated." );
}
}
return entailed;
}
/**
- * It would be useful to do better since we have the two ontologies here
+ * It would be useful to directly use the Ontologies since they are already loaded
+ * Two implementation of Alignment loading: one with intermediate file and one without.
*/
protected OWLOntologyManager manager = null;
protected OWLReasoner reasoner = null;
@@ -213,37 +220,42 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
public void loadPipedAlignedOntologies( final ObjectAlignment align ) throws AlignmentException {
PipedInputStream in = new PipedInputStream();
try {
- final PipedOutputStream out = new PipedOutputStream(in);
- new Thread(
- new Runnable(){
- public void run() {
- PrintWriter writer;
- try {
- writer = new PrintWriter (
- new BufferedWriter(
- new OutputStreamWriter( out, "UTF-8" )), true);
- } catch ( Exception ex ) {
- return; //throw new AlignmentException( "Cannot load alignments because of I/O errors" );
- }
- OWLAxiomsRendererVisitor renderer = new OWLAxiomsRendererVisitor( writer );
- renderer.init( new Properties() );
- // Generate the ontology as OWL Axioms
- try {
- align.render( renderer );
- } catch ( AlignmentException aex ) {
- return;
- } finally {
- writer.flush();
- writer.close();
- }
+ final PipedOutputStream out = new PipedOutputStream(in);
+ Thread myThread = new Thread(
+ new Runnable(){
+ public void run() {
+ PrintWriter writer = null;
+ try {
+ writer = new PrintWriter (
+ new BufferedWriter(
+ new OutputStreamWriter( out, "UTF-8" )), true);
+ OWLAxiomsRendererVisitor renderer = new OWLAxiomsRendererVisitor( writer );
+ renderer.init( new Properties() );
+ // Generate the ontology as OWL Axioms
+ align.render( renderer );
+ } catch ( Exception ex ) {
+ // No way to handle this exception???
+ // At worse, the other end will raise an exception
+ logger.error( "Cannot render alignment to OWL", ex );
+ } finally {
+ if ( writer != null ) {
+ writer.flush();
+ writer.close();
}
- }
- ).start();
- } catch ( Exception ex ) {};//java.io.UnsupportedEncodingException
+ }
+ }
+ }
+ );
+ myThread.start();
+ } catch ( UnsupportedEncodingException ueex ) {
+ throw new AlignmentException( "Cannot render alignment to OWL", ueex );
+ } catch ( IOException ioex ) {
+ throw new AlignmentException( "Cannot render alignment to OWL", ioex );
+ }
manager = OWLManager.createOWLOntologyManager();
- //System.err.println( al.getOntology1URI()+" ----> "+al.getFile1() );
- //System.err.println( al.getOntology2URI()+" ----> "+al.getFile2() );
+ logger.debug( "{} ----> {}", align.getOntology1URI(), align.getFile1() );
+ logger.debug( "{} ----> {}", align.getOntology2URI(), align.getFile2() );
manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology1URI() ),
IRI.create( align.getFile1() ) ) );
manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology2URI() ),
@@ -255,7 +267,9 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
OWLOntology ontology = manager.loadOntologyFromOntologyDocument( in );
reasoner = new Reasoner( ontology );
} catch ( OWLOntologyCreationException ooce ) {
- ooce.printStackTrace();
+ throw new AlignmentException( "Hermit : Cannot load alignment", ooce );
+ } catch ( IllegalArgumentException ilex ) {
+ throw new AlignmentException( "Hermit : Cannot load alignment", ilex );
}
}
@@ -271,14 +285,12 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
merged.deleteOnExit();
writer = new PrintWriter ( new FileWriter( merged, false ), true );
OWLAxiomsRendererVisitor renderer = new OWLAxiomsRendererVisitor(writer);
- //renderer.init( new Properties() );
- align.render(renderer);
- } catch (UnsupportedEncodingException uee) {
- uee.printStackTrace();
- } catch (AlignmentException ae) {
- ae.printStackTrace();
- } catch (IOException ioe) {
- ioe.printStackTrace();
+ renderer.init( new Properties() );
+ align.render( renderer );
+ } catch (UnsupportedEncodingException ueex) {
+ throw new AlignmentException( "Cannot render alignment to OWL", ueex );
+ } catch (IOException ioex) {
+ throw new AlignmentException( "Cannot render alignment to OWL", ioex );
} finally {
if ( writer != null ) {
writer.flush();
@@ -288,17 +300,21 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
// Load the ontology
manager = OWLManager.createOWLOntologyManager();
+ logger.debug( "{} ----> {}", align.getOntology1URI(), align.getFile1() );
+ logger.debug( "{} ----> {}", align.getOntology2URI(), align.getFile2() );
+ manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology1URI() ),
+ IRI.create( align.getFile1() ) ) );
+ manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology2URI() ),
+ IRI.create( align.getFile2() ) ) );
try {
- manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology1URI() ),
- IRI.create( align.getFile1() ) ) );
- manager.addIRIMapper(new SimpleIRIMapper( IRI.create( align.getOntology2URI() ),
- IRI.create( align.getFile2() ) ) );
manager.loadOntologyFromOntologyDocument( IRI.create( align.getFile1() ) );
manager.loadOntologyFromOntologyDocument( IRI.create( align.getFile2() ) );
OWLOntology ontology = manager.loadOntologyFromOntologyDocument( merged );
reasoner = new Reasoner( ontology );
- } catch (OWLOntologyCreationException ooce) {
- ooce.printStackTrace();
+ } catch ( OWLOntologyCreationException ooce ) {
+ throw new AlignmentException( "Hermit : Cannot load alignment", ooce );
+ } catch ( IllegalArgumentException ilex ) {
+ throw new AlignmentException( "Hermit : Cannot load alignment", ilex );
}
}
@@ -375,23 +391,13 @@ public class SemPRecEvaluator extends PRecEvaluator implements Evaluator {
throw new AlignmentException( "Cannot convert correspondence "+corresp );
}
- // This method can be suppressed
- public boolean isConsistent( OWLReasoner reasoner ) {
- return reasoner.isConsistent();
- }
-
- // This method can be suppressed
- public boolean isEntailed( OWLAxiom axiom ) {
- return reasoner.isEntailed( axiom );
+ // load ontology for the IDDLReasoner
+ public void loadOntology( IDDLReasoner reasoner, Object onto ) {
+ Ontology oo = (Ontology)onto;
+ URI f = oo.getFile();
+ if ( f == null ) f = oo.getURI();
+ reasoner.addOntology( f );
}
- //public void loadOntology( IDDLReasoner reasoner, Object onto ) {
- // System.err.println( reasoner +" -- "+onto );
- // Ontology oo = (Ontology)onto;
- // URI f = oo.getFile();
- // if ( f == null ) f = oo.getURI();
- // reasoner.addOntology( f );
- //}
-
}
diff --git a/src/fr/inrialpes/exmo/align/impl/eval/SymMeanEvaluator.java b/src/fr/inrialpes/exmo/align/impl/eval/SymMeanEvaluator.java
index f1e8c77517bbfd15c7f218185d90f883b5f4416a..a7b5d827beb181ece9103c0082cd3c49f477dfa2 100644
--- a/src/fr/inrialpes/exmo/align/impl/eval/SymMeanEvaluator.java
+++ b/src/fr/inrialpes/exmo/align/impl/eval/SymMeanEvaluator.java
@@ -62,9 +62,7 @@ public class SymMeanEvaluator extends BasicEvaluator implements Evaluator {
/** Creation **/
public SymMeanEvaluator( Alignment align1, Alignment align2 ) throws AlignmentException {
super(align1,align2);
- if ( !( align1 instanceof ObjectAlignment ) ||
- !( align2 instanceof ObjectAlignment ) )
- throw new AlignmentException( "Alignments should be ObjectAlignments, try to " );
+ convertToObjectAlignments( align1, align2 );
}
public double eval( Properties params ) throws AlignmentException {
@@ -78,6 +76,7 @@ public class SymMeanEvaluator extends BasicEvaluator implements Evaluator {
classScore = 0.;
propScore = 0.;
indScore = 0.;
+ // This seems to be correct
LoadedOntology onto1 = (LoadedOntology)((ObjectAlignment)align1).getOntologyObject1();
LoadedOntology onto2 = (LoadedOntology)((ObjectAlignment)align2).getOntologyObject1();