diff --git a/src/fr/inrialpes/exmo/align/impl/method/ClassNameEqAlignment.java b/src/fr/inrialpes/exmo/align/impl/method/ClassNameEqAlignment.java
deleted file mode 100644
index 2a4623c289eecfa41d75fa24e87a799444115cd5..0000000000000000000000000000000000000000
--- a/src/fr/inrialpes/exmo/align/impl/method/ClassNameEqAlignment.java
+++ /dev/null
@@ -1,82 +0,0 @@
-/*
- * $Id$
- *
- * Copyright (C) INRIA Rhône-Alpes, 2003-2004
- *
- * This program is free software; you can redistribute it and/or modify
- * it under the terms of the GNU Lesser General Public License as published by
- * the Free Software Foundation; either version 2.1 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
- */
-
-package fr.inrialpes.exmo.align.impl.method;
-
-import java.util.Iterator;
-import java.util.Hashtable;
-
-import org.semanticweb.owl.model.OWLOntology;
-import org.semanticweb.owl.model.OWLClass;
-import org.semanticweb.owl.model.OWLException;
-
-import org.semanticweb.owl.align.Alignment;
-import org.semanticweb.owl.align.AlignmentProcess;
-import org.semanticweb.owl.align.Cell;
-import org.semanticweb.owl.align.AlignmentException;
-import org.semanticweb.owl.align.Parameters;
-
-import fr.inrialpes.exmo.align.impl.BasicAlignment;
-
-/**
- * Represents an OWL ontology alignment. An ontology comprises a number of
- * collections. Each ontology has a number of classes, properties and
- * individuals, along with a number of axioms asserting information
- * about those objects.
- *
- * @author Jérôme Euzenat
- * @version $Id$
- */
-
-
-public class ClassNameEqAlignment extends BasicAlignment implements AlignmentProcess
-{
-
- /** Creation **/
- public ClassNameEqAlignment( OWLOntology onto1, OWLOntology onto2 ){
- init( onto1, onto2 );
- setType("11");
- };
-
- /** Processing **/
- /** This is not exactly equal, this uses toLowerCase() */
- public void align( Alignment alignment, Parameters params ) throws AlignmentException, OWLException {
- Hashtable table = new Hashtable();
- OWLClass cl = null;
-
- //ignore alignment;
- // This is a stupid O(2n) algorithm:
- // Put each class of onto1 in a hashtable indexed by its name (not qualified)
- // For each class of onto2 whose name is found in the hash table
- for ( Iterator it = onto1.getClasses().iterator(); it.hasNext(); ){
- cl = (OWLClass)it.next();
- if ( cl.getURI().getFragment() != null )
- table.put((Object)cl.getURI().getFragment().toLowerCase(), cl);
- }
- for ( Iterator it = onto2.getClasses().iterator(); it.hasNext(); ){
- OWLClass cl2 = (OWLClass)it.next();
- if ( cl2.getURI().getFragment() != null ) {
- cl = (OWLClass)table.get((Object)cl2.getURI().getFragment().toLowerCase());
- if( cl != null ){ addAlignCell( cl, cl2 ); }
- }
- }
- }
-
-}
diff --git a/src/fr/inrialpes/exmo/align/impl/method/PropSubsDistAlignment.java b/src/fr/inrialpes/exmo/align/impl/method/PropSubsDistAlignment.java
deleted file mode 100644
index 30e68a94ade776efc64fd0afca644e36aff19e24..0000000000000000000000000000000000000000
--- a/src/fr/inrialpes/exmo/align/impl/method/PropSubsDistAlignment.java
+++ /dev/null
@@ -1,131 +0,0 @@
-/*
- * $Id$
- *
- * Copyright (C) INRIA Rhône-Alpes, 2003-2004
- *
- * This program is free software; you can redistribute it and/or modify
- * it under the terms of the GNU Lesser General Public License as published by
- * the Free Software Foundation; either version 2.1 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
- */
-
-
-package fr.inrialpes.exmo.align.impl.method;
-
-import java.util.Iterator;
-import java.util.Vector;
-import java.util.Set;
-import java.util.HashSet;
-
-import org.semanticweb.owl.model.OWLOntology;
-import org.semanticweb.owl.model.OWLClass;
-import org.semanticweb.owl.model.OWLProperty;
-import org.semanticweb.owl.model.OWLFrame;
-import org.semanticweb.owl.model.OWLRestriction;
-import org.semanticweb.owl.model.OWLDescription;
-import org.semanticweb.owl.model.OWLNaryBooleanDescription;
-import org.semanticweb.owl.model.OWLException;
-import org.semanticweb.owl.model.OWLEntity;
-
-import org.semanticweb.owl.align.Alignment;
-import org.semanticweb.owl.align.AlignmentProcess;
-import org.semanticweb.owl.align.Cell;
-import org.semanticweb.owl.align.AlignmentException;
-import org.semanticweb.owl.align.Parameters;
-
-import fr.inrialpes.exmo.align.impl.DistanceAlignment;
-
-/** This class has been built for ISWC experiments with bibliography.
- * It implements a non iterative (one step) OLA algorithms based on
- * the name of classes and properties. It could be made iterative by
- * just adding range/domain on properties...
- * The parameters are:
- * - threshold: above what do we select for the alignment;
- * - epsillon [ignored]: for convergence
- * - pic1: weigth for class name
- * - pic2: weight for class attributes
- * - pia1 [ignored=1]: weigth for property name
- * - pia3 [ignored=0]: weigth for property domain
- * - pia4 [ignored=0]: weigth for property range
- *
- * @author Jérôme Euzenat
- * @version $Id$
- */
-
-
-public class PropSubsDistAlignment extends DistanceAlignment implements AlignmentProcess
-{
- /** Creation **/
- public PropSubsDistAlignment( OWLOntology onto1, OWLOntology onto2 ){
- super( onto1, onto2 );
- setType("**");
- };
-
- private double max( double i, double j) { if ( i>j ) return i; else return j; }
-
- /** Processing **/
- public void align( Alignment alignment, Parameters param ) throws AlignmentException, OWLException {
- //ignore alignment;
- double threshold = 1.; // threshold above which distances are to high
- int i, j = 0; // index for onto1 and onto2 classes
- int l1, l2 = 0; // length of strings (for normalizing)
- int nbprop1 = 0; // number of properties in onto1
- int nbprop2 = 0; // number of properties in onto2
- Vector proplist2 = new Vector(10); // onto2 properties
- Vector proplist1 = new Vector(10); // onto1 properties
- double propmatrix[][]; // properties distance matrix
-
- // Create property lists and matrix
- for ( Iterator it = onto1.getObjectProperties().iterator(); it.hasNext(); nbprop1++ ){
- proplist1.add( it.next() );
- }
- for ( Iterator it = onto1.getDataProperties().iterator(); it.hasNext(); nbprop1++ ){
- proplist1.add( it.next() );
- }
- for ( Iterator it = onto2.getObjectProperties().iterator(); it.hasNext(); nbprop2++ ){
- proplist2.add( it.next() );
- }
- for ( Iterator it = onto2.getDataProperties().iterator(); it.hasNext(); nbprop2++ ){
- proplist2.add( it.next() );
- }
- propmatrix = new double[nbprop1+1][nbprop2+1];
-
- if (debug > 0) System.err.println("Initializing property distances");
- for ( i=0; i<nbprop1; i++ ){
- OWLProperty cl = (OWLProperty)proplist1.get(i);
- String s1 = cl.getURI().getFragment().toLowerCase();
- for ( j=0; j<nbprop2; j++ ){
- cl = (OWLProperty)proplist2.get(j);
- String s2 = cl.getURI().getFragment().toLowerCase();
- propmatrix[i][j] = StringDistances.subStringDistance( s1, s2 );
- }
- }
-
- // Compute property distances
- if (debug > 0) System.err.print("Storing property alignment\n");
- for ( i=0; i<nbprop1; i++ ){
- boolean found = false;
- int best = 0;
- double max = threshold;
- for ( j=0; j<nbprop2; j++ ){
- if ( propmatrix[i][j] < max) {
- found = true;
- best = j;
- max = propmatrix[i][j];
- }
- }
- if ( found ) { addAlignDistanceCell( (OWLProperty)proplist1.get(i), (OWLProperty)proplist2.get(best), "=", max ); }
- }
-
- }
-
-}