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Commit a52d5651 authored by dcoudrin's avatar dcoudrin
Browse files

adding regex split to config, other things to ignore from manual

parent 6f241611
......@@ -51,4 +51,31 @@ export const LIST_COMMANDS_TO_IGNORE = [
export const CHAPTERS_TO_IGNORE = [
'Toplevel',
'Index',
'Bibliography',
];
export const CRUD_COMMANDS = [
{name: 'list_parameters', create: 'parameter', del: 'delete_parameter', regex: /\((.*?)=/},
{name: 'list_functions', create: 'function', del: 'delete_function'},
{name: 'list_initial_state', create: 'present', del: 'absent', regex: /\((.*?),/},
{name: 'list_reactions', create: 'add_reaction', del: 'delete_reaction', regex: /(.*)/},
{name: 'list_influences', create: 'add_influence'},
{name: 'list_events', create: 'add_event'},
{name: 'list_conservations', create: 'add_conservation', del: 'delete_conservation'},
]
export const CREATE_COMMANDS = [
'parameter',
'function',
'present',
'add_reaction',
'add_influence',
'add_event',
'add_conservation'
]
export const DELETE_COMMANDS = [
'delete_parameter',
''
]
This diff is collapsed.
......@@ -1161,7 +1161,29 @@
"metadata": {},
"outputs": [],
"source": [
"parameter(crycytoinit,8.03578267)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"present(CRY_cyto~{p},crycytopinit)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"parameter(crycytopinit,0.715418129)."
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
......
This diff is collapsed.
......@@ -300,5 +300,253 @@
%%%% Output: display_data
 
 
%%%% Output: display_data
 
%% Cell type:code id: tags:
```
parameter(t=23).
```
%% Cell type:code id: tags:
```
delete_parameter(vi).
```
%% Cell type:code id: tags:
```
delete_parameter(vd).
```
%% Cell type:code id: tags:
```
delete_parameter(Kc).
```
%% Cell type:code id: tags:
```
parameter(p=23).
```
%% Cell type:code id: tags:
```
undefined().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `undefined()'
%% Cell type:code id: tags:
```
undefined().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `undefined()'
%% Cell type:code id: tags:
```
undefined().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `undefined()'
%% Cell type:code id: tags:
```
undefined(V4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K4).
```
%% Cell type:code id: tags:
```
undefined(K3).
```
%% Cell type:code id: tags:
```
undefined(K2).
```
%% Cell type:code id: tags:
```
parameter(t=23).
```
%% Cell type:code id: tags:
```
delete_parameter(VM1).
```
%% Cell type:code id: tags:
```
delete_parameter(VM3).
```
%% Cell type:code id: tags:
```
delete_parameter(vi).
```
%% Cell type:code id: tags:
```
absent(Cyclin).
```
%% Cell type:code id: tags:
```
absent(Kinase).
```
%% Cell type:code id: tags:
```
absent(ProteaseP).
```
%% Cell type:code id: tags:
```
add_reaction(ds=3).
```
%%%% Output: error
%%%% Output: execute_result
ERROR: Unknown message: error(invalid_type(ds=3,expected(reaction,ds=3)))
%% Cell type:code id: tags:
```
add_reaction().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `add_reaction()'
%% Cell type:code id: tags:
```
parameter(t=4).
```
%% Cell type:code id: tags:
```
delete_reaction().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `delete_reaction()'
%% Cell type:code id: tags:
```
delete_reaction().
```
%%%% Output: error
%%%% Output: execute_result
ERROR: =../2: Domain error: `compound_non_zero_arity' expected, found `delete_reaction()'
%% Cell type:code id: tags:
```
delete_parameter(Kd).
```
%% Cell type:code id: tags:
```
delete_parameter(K1).
```
%% Cell type:code id: tags:
```
delete_parameter(K2).
```
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