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Lifeware
biocham
Commits
9ab7d965
Commit
9ab7d965
authored
Jul 25, 2019
by
SOLIMAN Sylvain
Browse files
Merge branch 'master' into develop
parents
39b3f284
cde7cbbe
Changes
6
Hide whitespace changes
Inline
Side-by-side
Makefile
View file @
9ab7d965
...
...
@@ -200,6 +200,8 @@ gadagne_restart: gadagne
release
:
@
read
-p
"Version number (e.g. 4.1.0): "
version
&&
\
sed
-i
''
-e
"s/^version('.*')/version('
$$
version')/"
about.pl
&&
\
sed
-i
''
-e
"s/
\"
version
\"
:
\"\(
.*
\)\"
/
\"
version
\"
:
\"
$$
version
\"
/"
biocham_jupyter/guinbextension/package.json
&&
\
sed
-i
''
-e
"s/__version__ = '
\(
.*
\)
'/__version__ = '
$$
version'/"
biocham_jupyter/kernel/biocham_kernel/__init__.py
&&
\
LC_ALL
=
C
sed
-i
''
-e
"s+^<h1>version.*</h1>+<h1>version
$$
version
$(
shell
date '+%B %Y'
)
</h1>+"
web/index.html
&&
\
git commit about.pl web/index.html
-m
"Version
$$
version"
&&
\
git tag
-a
v
$$
version
-m
"Version
$$
version"
&&
\
...
...
about.pl
View file @
9ab7d965
...
...
@@ -8,7 +8,7 @@
about
/
0
]).
version
(
'4.2.
0
'
).
version
(
'4.2.
2
'
).
copyright
(
'Copyright (C) 2003-2019 Inria, EPI Lifeware, Saclay-Île de France, France'
...
...
biocham_jupyter/guinbextension/package.json
View file @
9ab7d965
{
"name"
:
"gui"
,
"version"
:
"4.
1
.2
9
"
,
"version"
:
"4.
2
.2"
,
"description"
:
"biocham gui in jupyter notebook"
,
"main"
:
"src/index.js"
,
"scripts"
:
{
...
...
biocham_jupyter/kernel/biocham_kernel/__init__.py
View file @
9ab7d965
"""Example magic"""
__version__
=
'4.
1
.2
9
'
__version__
=
'4.
2
.2'
install.sh
View file @
9ab7d965
...
...
@@ -122,15 +122,19 @@ packages='python-sat jupyter bokeh ipywidgets'
if
hash
pip3 2>/dev/null
then
pip3
install
-U
$packages
elif
(
hash
pip 2> /dev/null
)
&&
[[
"pip --version"
=
"*python 3*"
]]
then
pip
install
-U
$packages
else
if
hash
conda 2>/dev/null
then
conda
install
-y
$packages
conda
install
-y
pip
pip
install
-U
$packages
else
if
[[
"
$conda_arch
"
==
"Linux"
]]
then
sudo
apt-get
-qy
install
python3-pip
pip
3
install
-U
$packages
pip
install
-U
$packages
else
# Note that miniconda is available through brew cask, but to avoid adding
# brew cask if not necessary, we just do without
...
...
@@ -139,7 +143,8 @@ else
./Miniconda3-latest-
${
conda_arch
}
-x86_64
.sh
-b
-p
${
HOME
}
/miniconda3
echo
'export PATH=${HOME}/miniconda3/bin:${PATH}'
>>
${
HOME
}
/.profile
export
PATH
=
${
HOME
}
/miniconda3/bin:
${
PATH
}
conda
install
-y
$packages
conda
install
-y
pip
pip
install
-U
$packages
fi
fi
fi
...
...
web/index.html
View file @
9ab7d965
...
...
@@ -32,7 +32,7 @@
</head>
<body>
<h1>
The Biochemical Abstract Machine BIOCHAM 4
</h1>
<h1>
version 4.2.
0
, August 2019
</h1>
<h1>
version 4.2.
2
, August 2019
</h1>
<div
class=
"authors"
>
<p>
...
...
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