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Commit 90d7ccd1 authored by FAGES Francois's avatar FAGES Francois
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parent df70eac8
......@@ -209,13 +209,12 @@ write('--> removing trivial reaction '), writeln(Reaction),
% Todo: the case of equivalent stiochiometry?
same_reaction:-
item([kind:reaction, id: Id, item: Reaction]),
reaction(Reaction, _Kinetics, Reactants, _Inhibitors, Products),
item([kind:reaction, id: Id2, item: Reaction2]),
Id\=Id2,
reaction(Reaction, _Kinetics, Reactants, _Inhibitors, Products),
reaction(Reaction2, _, Reactants, _, Products),
write('--> removing double reaction '), writeln(Reaction2),
delete_item(Id2).
delete_item(Id2).
% Isolated reactant in one reaction
......@@ -289,8 +288,8 @@ write('--> eliminating '), write(M), write(' reactant only in '), write(Reaction
% Todo: accept reversible reactions with syntax <=>
% Elimination of M in alpha 2<=>1 M =>3 gamma rewritten to alpha<=>gamma
% Elimination of M in alpha 2<=>1 beta+M =>3 gamma rewritten to alpha<=>beta <=>gamma
% Elimination of M in alpha 2<=>1 M =>3 gamma rewritten to alpha=>gamma
% Elimination of M in alpha 2<=>1 beta+M =>3 gamma rewritten to alpha<=>beta =>gamma
eliminate(M):-
reactions_with_product([M], [Reaction1]),
reactions_with_reactant([M], [ReactionA, ReactionB]),
......
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