diff --git a/src/post_treatments/aevol_post_change_size_neutral_mut.cpp b/src/post_treatments/aevol_post_change_size_neutral_mut.cpp index dbbcd5066f727a65477789a036f0f529610cc965..9edd098d2698bf319b8888c1f054a3c26a96fdd0 100644 --- a/src/post_treatments/aevol_post_change_size_neutral_mut.cpp +++ b/src/post_treatments/aevol_post_change_size_neutral_mut.cpp @@ -16,7 +16,7 @@ bool verbose = false; uint32_t seed_prng = 0; std::string inputFile = "input.json"; -std::string outputFile = "output.json"; +std::string outputFile = "directional_neutral_mut.json"; unsigned int wanted_size = 0; int delta = 0; @@ -51,6 +51,8 @@ void print_help(char *prog_path) { printf(" -s, --seed\n\trandom generator seed\n"); printf(" -h, --help\n\tprint this help, then exit\n"); printf(" -V, --version\n\tprint version number, then exit\n"); + printf(" -f, --input_file_name\n\tdefault is input.json\n"); + printf(" -o, --output_file_name\n\tdefault is directional_neutral_mut.json\n"); } void interpret_cmd_line_options(int argc, char **argv) { @@ -135,7 +137,7 @@ int main(int argc, char ** argv) { auto stoch_prng = std::make_shared<JumpingMT>(seed_prng); Individual ancestor = Individual(inputJson.getIndividuals()[0], 0, mut_prng, stoch_prng); - Individual * indiv = run_to_size(wanted_size, &ancestor); + Individual* indiv = run_to_size(wanted_size, &ancestor); std::vector<Individual*> indiv_vector; indiv_vector.push_back(indiv);