From d58d2d93489eb5159bb73cf71f7bc9d01aa30d4c Mon Sep 17 00:00:00 2001
From: David Parsons <david.parsons@inria.fr>
Date: Tue, 12 Dec 2023 18:36:37 +0100
Subject: [PATCH] fix position computation for small_insertion
---
src/libaevol/7/Dna_7.cpp | 9 ++++++++-
1 file changed, 8 insertions(+), 1 deletion(-)
diff --git a/src/libaevol/7/Dna_7.cpp b/src/libaevol/7/Dna_7.cpp
index 814713e05..6fb30c5d9 100644
--- a/src/libaevol/7/Dna_7.cpp
+++ b/src/libaevol/7/Dna_7.cpp
@@ -273,7 +273,14 @@ Mutation* Dna_7::do_small_deletion(size_type pos, int16_t nb_del) {
auto old_pos = pos;
// Remove promoters containing at least one nucleotide from the sequence to delete
- ann_chrsm_->promoter_list().remove_promoters_around(pos, Utils::mod(pos + nb_del, length_), length_);
+ auto end_del = size_type{0};
+ #ifdef __EUKARYOTE
+ end_del = std::min(length(), pos + nb_del);
+ #else
+ end_del = Utils::mod(pos + nb_del, length());
+ #endif
+
+ ann_chrsm_->promoter_list().remove_promoters_around(pos, end_del, length());
// Do the deletion and update promoter list
if (pos + nb_del <= length()) { // the deletion does not contain the origin of
--
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