# Copyright CNRS/Inria/UNS # Contributor(s): Eric Debreuve (since 2019), Morgane Nadal (2020) # # eric.debreuve@cnrs.fr # # This software is governed by the CeCILL license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL # license as circulated by CEA, CNRS and INRIA at the following URL # "http://www.cecill.info". # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # In this respect, the user's attention is drawn to the risks associated # with loading, using, modifying and/or developing or reproducing the # software by the user in light of its specific status of free software, # that may mean that it is complicated to manipulate, and that also # therefore means that it is reserved for developers and experienced # professionals having in-depth computer knowledge. Users are therefore # encouraged to load and test the software's suitability as regards their # requirements in conditions enabling the security of their systems and/or # data to be ensured and, more generally, to use and operate it in the # same conditions as regards security. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL license and that you accept its terms. import sys as sstm from pathlib import Path as path_t from brick.feature.analysis import Main as Analysis # from brick.io.storage.parameters import NutrimorphArguments _CSV_FEATURE_FILE = "/home/eric/Code/project/mno/nutrimorph/2-morgane/_result-SKIP/complete-20W/hypothalamus-priority/features.csv" def Main(): """""" if sstm.argv.__len__() < 2: print("Missing parameter file argument") sstm.exit(0) argument = path_t(sstm.argv[1]) if not (argument.is_file() and (argument.suffix.lower() == ".ini")): print("Wrong parameter file path or type, or parameter file unreadable") sstm.exit(0) # config = NutrimorphArguments(argument) # ( # *_, # input_cfg, # output_cfg, # __, # ___, # ) = config # base_folder = sorted((output_cfg["save_images"] / input_cfg["data_path"].stem).glob("2023*"))[-1] # output_cfg["save_images"] = base_folder / "image" # output_cfg["save_csv"] = base_folder / "features" # output_cfg["save_features_analysis"] = base_folder / "analysis" # path_1 = output_cfg["save_csv"] # path_2 = output_cfg["save_features_analysis"] # print(base_folder, path_1, path_2, sep="\n") Analysis(_CSV_FEATURE_FILE, path_t(_CSV_FEATURE_FILE).parent / "analysis")#str(path_1 / _CSV_FEATURE_FILE), path_2) if __name__ == "__main__": # Main()