# Copyright CNRS/Inria/UNS # Contributor(s): Eric Debreuve (since 2019) # # eric.debreuve@cnrs.fr # # This software is governed by the CeCILL license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL # license as circulated by CEA, CNRS and INRIA at the following URL # "http://www.cecill.info". # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # In this respect, the user's attention is drawn to the risks associated # with loading, using, modifying and/or developing or reproducing the # software by the user in light of its specific status of free software, # that may mean that it is complicated to manipulate, and that also # therefore means that it is reserved for developers and experienced # professionals having in-depth computer knowledge. Users are therefore # encouraged to load and test the software's suitability as regards their # requirements in conditions enabling the security of their systems and/or # data to be ensured and, more generally, to use and operate it in the # same conditions as regards security. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL license and that you accept its terms. import brick.processing.plot as ot_ from brick.component.extension import extension_t from brick.component.soma import soma_t from typing import Sequence, Tuple import matplotlib as mpl_ import matplotlib.pyplot as pl_ mpl_.use('TkAgg') def PrintConnectedExtensions(extensions: Sequence[extension_t]) -> None: # ext_uids = tuple( extension.uid for extension in extensions if extension.soma_uid is not None ) print( f" Connected Ext = {ext_uids.__len__()}" f"/{extensions.__len__()}\n" f" {ext_uids}" ) def PlotSomas(somas: Sequence[soma_t], som_nfo: dict, axes: dict) -> None: # for soma in somas: axes[soma.uid] = ot_.PlotLMap(som_nfo["lmp"], labels=soma.uid) pl_.title(f"Soma.{soma.uid}") pl_.matshow(som_nfo["influence_map"].max(axis=0)), pl_.title("Soma Influencess") pl_.show(block=True) pl_.matshow(som_nfo["dist_to_closest"].max(axis=0)), pl_.title("Soma Distances") pl_.show(block=True) def PlotExtensions( extensions: Sequence[extension_t], ext_nfo: dict, img_shape: Tuple[int, ...] ) -> None: # for extension in extensions: _ = ot_.PlotExtensions(extension, img_shape) pl_.title(f"Extension.{extension.uid}") pl_.matshow(ext_nfo["map"].max(axis=0)) pl_.title("Extensions Extremities") pl_.show(block=True) def PlotSomasWithExtensions(somas: Sequence[soma_t], som_nfo: dict, which: str) -> None: # any_plot = False for soma in filter(lambda elm: elm.has_extensions, somas): if which == "with_ext_of_ext": for extension in soma.extensions: if not extension.has_extensions: continue _ = ot_.PlotSomaWithExtensions(soma, som_nfo["lmp"]) pl_.title(f"Soma.{soma.uid} + Ext.{tuple(ext.uid for ext in soma.extensions)}") pl_.show(block=True) any_plot = True if any_plot: pl_.matshow(som_nfo["soma_w_ext_lmp"].max(axis=0)) pl_.title("Somas + Extensions") pl_.show(block=True)