From 3e7843747a7f02f030e3486d59e3a63a1b2a9793 Mon Sep 17 00:00:00 2001
From: oboulle <olivier.boulle@inria.fr>
Date: Thu, 19 May 2022 11:09:21 +0200
Subject: [PATCH] renamed scripts

---
 dna_store.sh | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/dna_store.sh b/dna_store.sh
index 4b88d7b..aac5a8c 100755
--- a/dna_store.sh
+++ b/dna_store.sh
@@ -139,7 +139,7 @@ simulation=$(get_container_param $container_path "simulation")
 
 if [ $simulation ]
 then
-	synthesis_script="$project_dir"/synthesis_modules/fragment_synthesis.py
+	synthesis_script="$project_dir"/synthesis_modules/synthesis_simulation.py
 	
 	for directory in "$container_path"/*/ ; do
 		call_function python3 "$synthesis_script" -i "$directory"/3_final_fragments.fasta -o "$directory"/4_synthesis.fasta -n $n_synth --i_error $i_error --d_error $d_error --s_error $s_error
@@ -155,7 +155,7 @@ fi
 
 if [ $simulation ]
 then
-	molecule_design_script="$project_dir"/synthesis_modules/fragment_assembly.py
+	molecule_design_script="$project_dir"/synthesis_modules/assembly_simulation.py
 	
 	assembly_type=$(get_container_param $container_path "assembly_type")
 	spacer=$(get_container_param $container_path "spacer")
-- 
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