From be91a6a239bc70928cd412be4e533461fe48c0c2 Mon Sep 17 00:00:00 2001 From: oboulle <olivier.boulle@inria.fr> Date: Mon, 16 Oct 2023 11:07:46 +0200 Subject: [PATCH] improve error messages --- dna_file_reader.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dna_file_reader.py b/dna_file_reader.py index 07cf8a0..c433a34 100755 --- a/dna_file_reader.py +++ b/dna_file_reader.py @@ -40,7 +40,7 @@ def read_fasta(fasta_file_path: str) -> dict: sequence_dict[sequence_name] = sequence else: - print("fasta format error :",line) + print("fasta format error in file",fasta_file_path,":",line) exit(1) fasta_file.close() return sequence_dict @@ -104,7 +104,7 @@ def read_fastq(fastq_file_path: str, use_score=False) -> dict: else: sequence_dict[sequence_name] = sequence else: - print("fastq format error :",line) + print("fastq format error in file",fastq_file_path,":",line) exit(1) fastq_file.close() return sequence_dict -- GitLab