From 649f6d5372de95da3b6cd4f0d18627b3b930f311 Mon Sep 17 00:00:00 2001
From: oboulle <olivier.boulle@inria.fr>
Date: Mon, 6 Mar 2023 13:56:52 +0100
Subject: [PATCH] changes in filename
---
pre_processing.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/pre_processing.py b/pre_processing.py
index 7df576b..936c3c6 100755
--- a/pre_processing.py
+++ b/pre_processing.py
@@ -194,7 +194,7 @@ def convert_to_sequence(compressed_dir_path, payload_fragments_dir_path):
# checking if it is a file
if os.path.isfile(file_path):
- output_file_path = os.path.join(payload_fragments_dir_path, filename.replace(".gz", ".fasta"))
+ output_file_path = os.path.join(payload_fragments_dir_path, filename.replace(".gz", ""))
dna_sequence = file_to_dna.encode_file(file_path, output_file_path) # convert binaries into a dna sequence and save result in the output file
--
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