Resolve "Propagate ignore-seed-reactions to CWL"

Closes #97 (closed)

assigned to @sherman

added 3 commits

• 2cfafe29 - wip cocomico.cwl
• e818b82a - Test cocomico specifying ignore exchanges
• af7c6070 - Global parameters before cocomico subcommand

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Project ID: pleiade:ccmc:cocomico:main

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• d6b0abb6 - CWL 1.2 Directory listing may be null

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marked this merge request as ready

Parameter order resolved thanks to https://cwl.discourse.group/t/insert-global-parameters-before-a-subcommand-argument/975

@cfrioux Ignoring seed-creating reactions seems like a reasonable optional global policy. The tests on sbml_noexch have growth only if the seed reactions are not ignored

merged

mentioned in commit e26d7948