First commit

CMakeLists.txt

+##  Copyright 2009-2016 Inria
+##
+## This file is part of the PaMPA software package for parallel
+## mesh partitioning and adaptation.
+##
+## PaMPA is free software: you can redistribute it and/or modify
+## it under the terms of the GNU General Public License as published by
+## the Free Software Foundation, either version 3 of the License, or
+## any later version.
+## 
+## PaMPA is distributed in the hope that it will be useful,
+## but WITHOUT ANY WARRANTY; without even the implied warranty of
+## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+## GNU General Public License for more details.
+## 
+## In this respect, the user's attention is drawn to the risks associated
+## with loading, using, modifying and/or developing or reproducing the
+## software by the user in light of its specific status of free software,
+## that may mean that it is complicated to manipulate, and that also
+## therefore means that it is reserved for developers and experienced
+## professionals having in-depth computer knowledge. Users are therefore
+## encouraged to load and test the software's suitability as regards
+## their requirements in conditions enabling the security of their
+## systems and/or data to be ensured and, more generally, to use and
+## operate it in the same conditions as regards security.
+## 
+## The fact that you are presently reading this means that you have had
+## knowledge of the GPLv3 license and that you accept its terms.
+##
+#############################################################
+##
+##    \file        CMakeLists.txt
+##
+##    \authors     Cedric Lachat
+##
+##    \brief       This file is main configuration file
+##                 to build PaMPA with CMake
+##
+##    \date        Version 1.0: from: 31 May 2011
+##                              to:    4 Oct 2016
+##
+#############################################################
+
+
+
+
+
+########################
+#  Main configuration  #
+########################
+
+if (DEFINED ENV{JENKINS})
+  set(CMAKE_BUILD_TYPE $ENV{BUILD} CACHE STRING "toto" FORCE)
+endif ()
+
+
+cmake_minimum_required(VERSION 2.6.4)
+if (NOT DEFINED FORTRAN_INTERFACE)
+endif ()
+if (FORTRAN_INTERFACE)
+endif ()
+if ((NOT DEFINED FORTRAN_INTERFACE) OR (FORTRAN_INTERFACE))
+  project(PAMPA C Fortran CXX)
+else ()
+  project(PAMPA C)
+  #project(PAMPA C CXX) # XXX XXX à remettre
+endif ()
+
+# Add CTest
+enable_testing()
+
+# Add modules
+include(CMakeDependentOption)
+include(CheckSymbolExists)
+
+
+set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/CMakeScripts)
+set(CMAKE_Fortran_MODULE_DIRECTORY ${PROJECT_BINARY_DIR}/MOD)
+
+# Define some variables which will be fill in with ccmake or cmake-gui
+set(VALGRIND_EXE "/usr/bin/valgrind" CACHE TYPE "Valgrind with its path")
+set(VALGRIND_ARGS "" CACHE TYPE "Valgrind arguments")
+mark_as_advanced(VALGRIND_EXE VALGRIND_ARGS)
+
+option(FORTRAN_INTERFACE "Build fortran interface to use PaMPA in fortran programs" OFF)
+if (FORTRAN_INTERFACE)
+  add_definitions (-DNOT_DOXYGEN)
+endif ()
+
+set (PTHREAD_LIST "None;IO;Comm;All")
+set (PTHREAD "All" CACHE STRING "Pthread use level: possible values ${PTHREAD_LIST}")
+set_property (CACHE PTHREAD PROPERTY STRINGS ${PTHREAD_LIST})
+list (FIND PTHREAD_LIST ${PTHREAD} FND)
+
+if (${FND} EQUAL -1)
+  message (FATAL_ERROR "Value for PTHREAD is not correct, you have to choose one item in the following list ${PTHREAD_LIST}")
+endif ()
+
+
+set (COMM_TYPE_LIST "Automatic;Point-to-point;Collective")
+set (COMM_TYPE "Point-to-point" CACHE STRING "Communication type chosen to exhange data between subdomains: possible values ${COMM_TYPE_LIST}")
+set_property (CACHE COMM_TYPE PROPERTY STRINGS ${COMM_TYPE_LIST})
+list (FIND COMM_TYPE_LIST ${COMM_TYPE} FND)
+
+if (${FND} EQUAL -1)
+  message (FATAL_ERROR "Value for COMM_TYPE is not correct, you have to choose one item in the following list ${COMM_TYPE_LIST}")
+endif ()
+
+if (COMM_TYPE STREQUAL "Point-to-point")
+  add_definitions (-DPAMPA_COMM_PTOP)
+elseif (COMM_TYPE STREQUAL "Collective")
+  add_definitions (-DPAMPA_COMM_COLL)
+endif ()
+
+set (INT_SIZE_LIST "Default;32bits;64bits;long")
+set (INT_SIZE "Default" CACHE STRING "Integer size for PAMPA_Num and PAMPAF_Num, you have to choose one item between ${INT_SIZE_LIST}")
+set_property (CACHE INT_SIZE PROPERTY STRINGS ${INT_SIZE_LIST})
+list (FIND INT_SIZE_LIST ${INT_SIZE} FND)
+
+if (${FND} EQUAL -1)
+  message (FATAL_ERROR "Value for INT_SIZE is not correct, you have to choose one item in the following list ${INT_SIZE_LIST}")
+endif ()
+
+if (INT_SIZE STREQUAL "32bits")
+  add_definitions (-DINTSIZE32)
+elseif (INT_SIZE STREQUAL "64bits")
+  add_definitions (-DINTSIZE64)
+elseif (INT_SIZE STREQUAL "long")
+  add_definitions (-DLONG)
+endif ()
+
+option(PAMPA_ADAPT "Adapt functions" ON)
+if (PAMPA_ADAPT)
+  add_definitions (-DPAMPA_ADAPT)
+endif ()
+
+option(PAMPA_MULTILEVEL "Multilevel meshes" OFF)
+
+option(PAMPA_RENAME "Rename internal function names" ON)
+if (PAMPA_RENAME)
+  add_definitions (-DPAMPA_RENAME)
+endif ()
+
+option(COMMON_MEMORY_TRACE "In-house memory usage tracing" OFF)
+if (COMMON_MEMORY_TRACE)
+  add_definitions (-DCOMMON_MEMORY_TRACE)
+endif ()
+
+cmake_dependent_option(COMMON_MEMORY_USER_FILE "User file (defined as char PAMPA_memFilename[]) for memory logs" OFF "COMMON_MEMORY_TRACE" OFF)
+if (COMMON_MEMORY_USER_FILE)
+  add_definitions (-DCOMMON_MEMORY_USER_FILE)
+endif ()
+
+option(SAMPLES "Build samples" ON)
+if (SAMPLES)
+  set (SAMPLE_TYPE_LIST "All;Compounds;Units")
+  set (SAMPLE_TYPE "All" CACHE STRING "Choose which categories of samples: possible values ${SAMPLE_TYPE_LIST}")
+  set_property (CACHE SAMPLE_TYPE PROPERTY STRINGS ${SAMPLE_TYPE_LIST})
+  list (FIND SAMPLE_TYPE_LIST ${SAMPLE_TYPE} FND)
+
+  if (${FND} EQUAL -1)
+    message (FATAL_ERROR "Value for SAMPLE_TYPE is not correct, you have to choose one item in the following list ${SAMPLE_TYPE_LIST}")
+  endif ()
+
+  set (SAMPLE_PREFIX "pampa")
+endif ()
+
+if (EXISTS ${PAMPA_SOURCE_DIR}/doc/CMakeLists.txt)
+  option(PAMPA_BUILD_DOC "Build documentation for PaMPA" OFF)
+  mark_as_advanced(PAMPA_BUILD_DOC)
+endif()
+option(PAMPA_BUILD_ALONE "Build PaMPA in one build folder" OFF)
+mark_as_advanced(PAMPA_BUILD_ALONE)
+#######################
+# Find some libraries #
+#######################
+
+
+if (COMMON_COMPRESSION)
+  # BZIP2
+  find_package (BZip2)
+  if (BZIP2_FOUND)
+    add_definitions (-DCOMMON_FILE_COMPRESS_BZ2)
+    include_directories(${BZIP2_INCLUDE_DIR})
+    list (APPEND PAMPA_DEPENDENCIES ${BZIP2_LIBRARY} ${BZIP2_LIBRARIES})
+  endif (BZIP2_FOUND)
+  ## LZMA
+  #find_package (LibLZMA)
+  #if (LibLZMA_FOUND)
+  #  add_definitions (-DCOMMON_FILE_COMPRESS_LZMA)
+  #  include_directories(${LibLZMA_INCLUDE_DIR})
+  #  list (APPEND PAMPA_DEPENDENCIES ${LibLZMA_LibRARIES})
+  #endif (LibLZMA_FOUND)
+  # ZLIB
+  find_package (ZLIB)
+  if (ZLIB_FOUND)
+    add_definitions (-DCOMMON_FILE_COMPRESS_GZ)
+    include_directories(${ZLIB_INCLUDE_DIR})
+    list (APPEND PAMPA_DEPENDENCIES ${ZLIB_LIBRARIES})
+  endif (ZLIB_FOUND)
+endif (COMMON_COMPRESSION)
+
+
+# PT-Scotch
+option (PTSCOTCH "Build PaMPA with PT-Scotch dependencies" ON)
+if (PTSCOTCH)
+  add_definitions (-DPTSCOTCH)
+  set(PTSCOTCH_HOME "" CACHE PATH "PT-Scotch home directory")
+  find_package(PTSCOTCH REQUIRED)
+
+  file(STRINGS "${PTSCOTCH_INCLUDE_DIR}/scotch.h" CHECK_SCOTCH_VERSION REGEX "^[ \t]*#define[ \t]+SCOTCH_[A-Z]+[ \t]+[0-9]+.*$")
+
+  foreach(item IN ITEMS VERSION RELEASE PATCHLEVEL)
+    string(REGEX REPLACE ".*#define[ \t]+SCOTCH_${item}[ \t]+([0-9]+).*" "\\1" XYZ ${CHECK_SCOTCH_VERSION})
+    set (SCOTCH_${item} ${XYZ})
+  endforeach()
+  # XXX uncomment this test when Scotch 6.0.4 will be available
+  #if (${SCOTCH_VERSION}.${SCOTCH_RELEASE}.${SCOTCH_PATCHLEVEL} VERSION_LESS 6.0.4)
+  #  message (FATAL_ERROR "PT-Scotch version must be greater than or equal to 6.0.4")
+  #endif ()
+  include_directories(${PTSCOTCH_INCLUDE_DIR})
+else ()
+  unset (PTSCOTCH_HOME CACHE)
+endif  ()
+
+
+# MPI
+set(MPI_COMPILER mpicc)
+find_package(MPI REQUIRED)
+include_directories(${MPI_INCLUDE_PATH})
+if (MPI_C_LIBRARIES)
+  list (APPEND PAMPA_DEPENDENCIES ${MPI_C_LIBRARIES} m)
+else ()
+  list (APPEND PAMPA_DEPENDENCIES ${MPI_LIBRARIES} m)
+endif ()
+
+if (PAMPA_BUILD_ALONE)
+include_directories(${PAMPA_SOURCE_DIR}/include)
+endif ()
+
+
+# Pthread
+if (NOT PTHREAD STREQUAL "None")
+  find_package(Threads REQUIRED)
+  if (NOT CMAKE_USE_PTHREADS_INIT) # if pthread was not found
+    message (FATAL_ERROR "Pthread are not available")
+  endif()
+  if (PTHREAD STREQUAL "IO" OR PTHREAD STREQUAL "All")
+    add_definitions(-DCOMMON_PTHREAD)
+  endif ()
+  if (PTHREAD STREQUAL "Comm" OR PTHREAD STREQUAL "All")
+    add_definitions(-DPAMPA_PTHREAD)
+  endif ()
+  list (APPEND PAMPA_DEPENDENCIES ${CMAKE_THREAD_LIBS_INIT})
+endif ()
+
+# Define PaMPA version
+set(PAMPA_CORE_VERSION "2")
+set(PAMPA_CORE_RELEASE "0")
+set(PAMPA_CORE_PATCHLEVEL "0")
+
+# Add some flags
+add_definitions(-Drestrict=__restrict)
+
+
+# Check CMake version
+if (${CMAKE_VERSION} VERSION_LESS 2.8.4)
+  set (OLD_CMAKE 1)
+endif ()
+set (LIBRARY_OUTPUT_DIRECTORY ${PAMPA_SOURCE_DIR}/pampa_lib)
+
+
+# SCM Version Option
+option (SCM_VERSIONS "Get SCM Versions for softwares" OFF)
+if (SCM_VERSIONS)
+  add_definitions(-DSCM_VERSIONS)
+  if (PTSCOTCH)
+    set(SCM_PTSCOTCH_HOME "" CACHE PATH "SCM PT-Scotch path")
+    list(APPEND VERSIONS_EXT_ARGS
+      PTSCOTCH:${SCM_PTSCOTCH_HOME}:${PTSCOTCH_LIBRARY},${SCOTCH_LIBRARY},${PTSCOTCH_EXTRA_LIBRARY})
+    list(APPEND VERSIONS_EXT_DEPS
+      ${PTSCOTCH_LIBRARY} ${SCOTCH_LIBRARY} ${PTSCOTCH_EXTRA_LIBRARY})
+  endif  ()
+endif ()
+
+option(COMMON_COMPRESSION "Build with founded compression libraries (CMake will search automatically which are availables" ON)
+
+
+########################
+#       tests          #
+########################
+
+if (CMAKE_VERSION VERSION_GREATER "2.8.11")
+  file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/test2.c "
+  #include <stdio.h>
+  #include <stdlib.h>
+
+  #ifdef EXT
+  extern
+  #endif
+  inline void f() {
+  }
+  ")
+
+  file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/test.c "
+  #include <stdio.h>
+  #include <stdlib.h>
+
+  int main() {
+  f();
+  return 0;
+  }
+  ")
+
+  try_compile(TEST_INLINE ${CMAKE_CURRENT_BINARY_DIR}/test
+    SOURCES ${CMAKE_CURRENT_BINARY_DIR}/test.c ${CMAKE_CURRENT_BINARY_DIR}/test2.c
+    )
+
+  if (NOT TEST_INLINE)
+    try_compile(TEST_INLINE ${CMAKE_CURRENT_BINARY_DIR}/test2
+      SOURCES ${CMAKE_CURRENT_BINARY_DIR}/test.c ${CMAKE_CURRENT_BINARY_DIR}/test2.c
+      COMPILE_DEFINITIONS -DEXT
+      )
+    if (NOT TEST_INLINE)
+      message (FATAL_ERROR "internal error")
+    else ()
+      add_definitions (-DPAMPA_WORD_EXTERN)
+    endif ()
+  endif ()
+else (CMAKE_VERSION VERSION_GREATER "2.8.11")
+  if (CMAKE_C_COMPILER MATCHES "gcc") # XXX Is-it just for gcc?
+    file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/test.c "
+    #include <stdio.h>
+    #include <stdlib.h>
+
+    extern
+    inline void f() {
+    }
+
+    int main() {
+    f();
+    return 0;
+    }
+    ")
+
+    try_compile(TEST_INLINE ${CMAKE_CURRENT_BINARY_DIR}/test
+      ${CMAKE_CURRENT_BINARY_DIR}/test.c
+      )
+
+    if (TEST_INLINE)
+      add_definitions (-DPAMPA_WORD_EXTERN)
+    endif ()
+
+  endif (CMAKE_C_COMPILER MATCHES "gcc")
+endif (CMAKE_VERSION VERSION_GREATER "2.8.11")
+
+########################
+#    libpampa     #
+########################
+
+add_subdirectory(${PAMPA_SOURCE_DIR}/src/libpampa)
+
+# Add dependency on PT-Scotch
+if (PTSCOTCH)
+  list (APPEND PAMPA_DEPENDENCIES ${PTSCOTCH_LIBRARY})
+  list (APPEND PAMPA_DEPENDENCIES ${SCOTCH_LIBRARY})
+  list (APPEND PAMPA_DEPENDENCIES ${PTSCOTCH_EXTRA_LIBRARY})
+endif ()
+
+
+
+########################
+#        samples       #
+########################
+
+if (SAMPLES)
+add_subdirectory(${PAMPA_SOURCE_DIR}/src/samples)
+endif ()
+
+
+
+########################
+#        tests         #
+########################
+
+# Add target on Unix
+if(UNIX)
+  add_custom_target(all_and_test COMMAND make all COMMAND ctest --force-new-ctest-process --output-on-failure)
+endif(UNIX)
+
+
+
+
+
+########################
+#      real clean      #
+########################
+
+if(UNIX)
+  if (PAMPA_BUILD_ALONE)
+    add_custom_target(realclean
+      COMMAND make clean
+      COMMAND ${CMAKE_COMMAND} -E remove ${PAMPA_SOURCE_DIR}/include/*
+      COMMAND ${CMAKE_COMMAND} -E remove ${PAMPA_SOURCE_DIR}/lib/*
+      )
+  else ()
+    add_custom_target(realclean
+      COMMAND make clean
+      )
+  endif ()
+endif(UNIX)
+
+########################
+#       install        #
+########################
+
+
+
+
+########################
+#      uninstall       #
+########################
+
+# uninstall target
+configure_file(
+  "${PAMPA_SOURCE_DIR}/src/cmake_uninstall.cmake.in"
+  "${CMAKE_CURRENT_BINARY_DIR}/cmake_uninstall.cmake"
+  IMMEDIATE @ONLY)
+
+add_custom_target(uninstall
+    COMMAND ${CMAKE_COMMAND} -P ${CMAKE_CURRENT_BINARY_DIR}/cmake_uninstall.cmake)
+
+
+
+
+
+
+########################
+#    documentation     #
+########################
+
+