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GATB
gatb-core
Commits
36e6b84a
Commit
36e6b84a
authored
Dec 31, 2015
by
Rayan Chikhi
Browse files
more verbose and non-blocking error message for adjacency
parent
c56289e4
Changes
1
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Inline
Side-by-side
gatb-core/src/gatb/debruijn/impl/Graph.cpp
View file @
36e6b84a
...
...
@@ -3508,8 +3508,8 @@ void GraphTemplate<Node, Edge, GraphDataVariant>::deleteNode (Node node) const
}
if
(
deleted
==
false
)
{
std
::
cout
<<
"
was supposed to delete a node but couldn't find it :(."
<<
std
::
endl
;
// TODO: remove if no problem after a while
exit
(
1
)
;
std
::
cout
<<
"
[bug detected in adjacency data structure] was supposed to delete node "
<<
this
->
toString
(
node
)
<<
" but couldn't find it :(."
<<
std
::
end
std
::
cout
<<
"assembly may be inaccurate around this kmer. will continue assembling anyway"
<<
std
::
endl
;
}
}
...
...
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