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GATB
gatb-core
Commits
324021c5
Commit
324021c5
authored
Feb 03, 2016
by
Guillaume Rizk
Browse files
deactivating minimizer fastmode, bug lead to kmer duplication
parent
a175f13a
Changes
1
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gatb-core/src/gatb/kmer/impl/Model.hpp
View file @
324021c5
...
...
@@ -1357,7 +1357,8 @@ struct Kmer
* Note: only used for KmerCanonicals */
void
computeNewMinimizer
(
KmerMinimizer
<
ModelCanonical
,
Comparator
>&
kmer
,
bool
fastMethod
=
true
)
const
{
if
(
!
fastMethod
||
_freq_order
)
// fast method doesn't work with frequency order
//if (!fastMethod || _freq_order) // fast method doesn't work with frequency order
//temporarily desactivate fastmode, seem to returns wrong minimizer and leads to duplicated kmer output
{
computeNewMinimizerOriginal
(
kmer
);
return
;
...
...
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